jdahm – Page 42 – HSLS Update

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“From DNA to Beer: Harnessing Nature in Medicine & Industry”

Microbes—tiny organisms too small to be seen with the naked eye—have altered human history. Life forms such as bacteria, yeasts, and molds can cause sickness or restore health, and help produce foods and beverages for our consumption. Drawing from the collections of the National Museum of American History and the National Library of Medicine, From DNA to Beer is an exhibit that promotes public understanding of the dynamic relationship between microbes, technology, science, and medicine.

From DNA to Beer will be on exhibit at Falk Library from August 31 through October 10, 2015. In conjunction with the exhibit, the following special lectures are scheduled:

“Background to the Discovery of DNA” by Adam Davis, MA
Thursday, September 17, 2015, at 6 p.m.
Lecture Room 1105, Scaife Hall
Following the lecture, attendees are invited to view the exhibit during a reception in Falk Library, 200 Scaife Hall

“Erythropoeitin: A Case History – The Promise and Perils of Harnessing Nature” by Jamie Johnston, MD
Thursday, October 8, 2015, at 6 p.m.
Lecture Room 1105, Scaife Hall

A special Molecular Biology workshop, “Delve into the World of Genes, Genomes, & Microbes with InfoBoosters,” will be held on Monday, September 21, at 1 p.m. in Falk Library, Classroom 2.

The exhibit is comprised of six panels, a video presentation, and display cases, all of which can be seen on the main floor of Falk Library. The exhibit is free and open to the public during Falk Library’s regular hours.

~Julia Dahm

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Nazarbayev University Medical Librarians Visit HSLS

The University of Pittsburgh School of Medicine has a partnership with the Nazarbayev University (NU) in Astana, Kazakhstan, to advise on the establishment of a new medical school. Barbara Epstein, HSLS director, and Nancy Tannery, HSLS senior associate director, traveled to Astana this past March.

In early May, two NU librarians, Piotr Lapo, the general manager, and Anar Dautova, one of the subject librarians who will be liaison to the school of medicine, visited HSLS. The goal of the visit was to learn firsthand how an academic health sciences library in the U.S. supports a medical school curriculum. They met with the library’s leadership team, digital library services, and reference librarians.

Discussions with librarians in Digital Library Services focused on cataloging with medical subject headings, metadata, resources in both print and electronic formats, and the use of a LinkSolver, a resource that facilitates linking from databases to full text articles. Reference librarians provided instructional sessions about resources and topics of interest to medical students and medical school faculty. The purpose of these sessions was two-fold: to teach the NU librarians about particular topics, and also to demonstrate how HSLS librarians offer instruction to students and faculty. A mock library orientation modeled the Cephalonian Method, a method of active learning, which has received very positive feedback from the medical students here at Pitt. They also had a chance to meet and talk with the six HSLS liaison librarians about issues related to supporting students and faculty in a particular discipline.

A highlight of their visit was a presentation by Dautova and Lapo about Kazakhstan’s history and information about the NU Library.

In addition to learning about a medical school library, the NU librarians visited with the leadership teams at the University Library System at Pitt and the libraries at Carnegie Mellon University. This provided a broad discussion about the changes in academic libraries and what the future might hold. They also had time during their visit for some sightseeing, including a visit to the Cathedral of Learning and the Nationality Rooms, and an incline ride on Mount Washington.

~Nancy Tannery

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ClinicalKey: Tips for Printing Book Chapters & PDF Access

HSLS provides access to hundreds of medical e-books through ClinicalKey. In order to print a book chapter or access the PDF version of a book chapter in ClinicalKey, you must first create a Personal Account and log in. To do this, go to the HSLS home page and click on ClinicalKey in the Quick Links box. Select the Registration link on the top right corner of the ClinicalKey home page. You will be asked to enter a Username (your e-mail address) and a Password. These will serve as your credentials to log in to ClinicalKey. Once you have logged in, you can open the PDF versions of book chapters as well as print them.

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F1000Workspace: Collect References, Write, & Collaborate More Effectively

F1000Workspace is an innovative suite of tools for collecting, managing, writing, sharing, collaborating, and citing scientific literature. This powerful new capability from Faculty of 1000 allows researchers to instantly save and annotate articles from the Web, write better and faster with a Word plugin, and import and share references with colleagues.

With F1000Workspace, you can:

Use the browser extension to import article PDFs, citation data, and full text links
Highlight and add notes to online articles
Discuss articles and share annotations with collaborators
Set up automatic PDF imports
Save unlimited numbers of references and PDFs
Save references for offline access
Search PubMed from Word
Find and cite references without leaving Word
Access from any computer, no syncing required
Get article recommendations from F1000
Receive relevant citation recommendations in Word based on your reference list
Collect and share references with collaborators
Share Word documents with editable citations and bibliographies
Export references in BibTex or RIS
Import references from EndNote, Mendeley, Zotero, etc.

Access to F1000Workspace is free upon registration with a Pitt e-mail ID. Installation of the browser extension enables you to directly save online articles with the click of a button, as well as highlight text and add notes. These annotations are saved on the journal’s Web version and the PDF, and can be shared with collaborators. Installation of the Word plugin enables you to access references instantly as you write, get suggestions for relevant references taken from your reference library and PubMed, search PubMed without leaving Word, and automatically format the bibliography to any citation style (>7,000 options).

F1000Workspace helps researchers to collaborate, share, and write all in the same virtual space. All references and PDFs are stored in a secure cloud and can be accessed from any computer.

Click here to find more information, register, and install the browser extension and Word plugin. Contact the HSLS Molecular Biology Information Service with any questions and to let us know how you have incorporated F1000Workspace into your own workflow.

~Carrie Iwema

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Treasures from the Rare Book Room: Philip Verheyen and His Corporis Humani Anatomiae

The riveting story circulating on the Internet about Philip Verheyen dissecting his own amputated limb effectively draws attention to the Flemish surgeon and anatomist. He came from a modest family and was educated, with the help of private sponsors and communal funds, at the University of Leuven in Belgium. A brilliant student, he was on the fast track to complete his education to become a clergyman only to be halted by sudden illness which resulted in the amputation of his leg. Forced to change his career, he turned to medicine. After earning his degree in 1681, he continued his education at the University of Leyden, Holland, where he completed his doctoral dissertation and became acquainted with the greatest Dutch anatomists of his time. He returned to Leuven, where he was eventually granted the title of Royal Professor of Anatomy and was elected as Rector Magnificus in 1689.

Philip Verheyen (1648-1710) was a well-read, independent researcher, though his working conditions as a professor of anatomy in Leuven were far from perfect: the bodies were scarce and difficult to acquire, and there were no facilities to dissect them (the first theater for dissections was not built until 1744, long after his death). He was not as prolific an author as his northern colleagues. He only published five books. His most renowned work, Corporis humani anatomiae, published in 1693, was reprinted 21 times and became the textbook of choice for students at many European universities. The illustrations were of lesser quality (he most likely drew them himself) than those in contemporary atlases written for anatomists. However, Verheyen’s book was not only an atlas, but also a concise manual demonstrating to its readers that studying anatomy is an integral part of studying physiology. It was written specifically for students and by the author’s design was meant to be affordable. It remained a work of reference until the middle of 18th century.

Falk Library has a second edition of Corporis humani anatomiae, published posthumously in 1710, at the request of Verheyen’s widow.

Corporis humani anatomiae, 1710 — *Corporis humani anatomiae*, 1710

The book can be viewed in the Rare Book Room by appointment.

~Gosia Fort

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HSLS Staff News

The HSLS Staff News section includes recent HSLS presentations, publications, staff changes, staff promotions, degrees earned, etc.

News

Nancy Tannery, HSLS senior associate director, has been appointed Chair of the Literature Selection and Technical Review Committee (LSTRC) for the coming year July 2015–June 2016. A National Library of Medicine committee, LSTRC advises on matters of policy related to the evaluation and recommendation of biomedical publications to be considered for indexing and inclusion in MEDLINE.

Publications

Author name in bold is HSLS-affiliated

I.M. Gathuru, R.E. Tarter, and Michele Klein-Fedyshin, reference librarian, published “Review of Hookah Tobacco Smoking among College Students: Policy Implications and Research Recommendations” in the American Journal of Drug and Alcohol Abuse, June 2015, 9: 1-9.

Presentations

Presenters’ names in bold are HSLS-affiliated

Lydia Collins, consumer health coordinator, and Kate Flewelling, outreach coordinator, NN/LM Middle Atlantic Region, presented daily workshops on “Combatting Information Fatigue: Health Information Resources for Veterans” at the Veterans of Foreign Wars National Convention, in Pittsburgh, PA, from July 18-21, 2015.

Farewell

Farewell to Josh Paltrineri, main desk library assistant, who is leaving HSLS to attend the Southern Methodist University Dedman School of Law.

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Classes August 2015

HSLS offers classes on database searching, software applications such as Prezi, bibliographic management, molecular biology and genetics, and library orientations. For more information, visit the online course descriptions.

Classes are held on the first floor of Falk Library (200 Scaife Hall) in Classroom 1 and on the upper floor of the library in Classroom 2. All classes are open to faculty, staff, and students of the schools of the health sciences at the University of Pittsburgh, who will need a valid Pitt ID or e-mail account. They are also open to UPMC residents and fellows, who will need to show their UPMC IDs.

No registration is required, except where noted. Classes marked with an asterisk (*) qualify for American Medical Association Category 2 continuing education credit.

Class schedules are subject to change. Please consult the online class calendar for the most current information.

FlashClass

FlashClass is a “deal of the week” Groupon-like offer of timely and useful learning. Each week’s offer proposes one or two topics, and you’re invited to sign up to attend a one-hour class the following week. If at least three people sign up, we’ll hold the class. (We’ll notify you either way.)

HSLS CLASSES

EndNote Basics (Falk Library Classroom 2)

Tuesday, August 4

2-4 p.m.

Painless PubMed* (Falk Library Classroom 1)

Thursday, August 6	4-5 p.m.
Friday, August 14	Noon-1 p.m.
Monday, August 17	9-10 a.m.
Tuesday, August 25	1-2 p.m.

Prezi for Presentations (Falk Library Classroom 2)

Thursday, August 20

1-3 p.m.

MOLECULAR BIOLOGY AND GENETICS RESOURCES

SNPs & Genetic Variation* (Falk Library Classroom 2)

Wednesday, August 12

1-3 p.m.

CUSTOMIZED CLASSES

Customized classes can be developed for your department, course, or other group.

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DMPTool: Create and Share Data Management Plans

Data management plans (DMPs) are now a standard part of grant proposals for most funding agencies. A DMP should describe what you will do with your data during your research and once your project is completed. The plan may include details of the types of data you will collect, how you will preserve it, and how you will share the data with others.

To help researchers easily create and share DMPs, the University of Pittsburgh has become a partner institution of the DMPTool. The DMPTool offers ready-to-use templates to guide researchers through the process of generating a comprehensive plan tailored to the specific requirements of agencies, such as the National Institutes of Health, National Science Foundation, and Department of Energy. Links to general and institutional resources are available throughout the templates, offering researchers additional support.

By logging into the DMPTool with a University of Pittsburgh Computing Account username and password, researchers are able to create customized DMPs, add co-owners and editors to plans, and share created DMPs with those only from the University of Pittsburgh, or publicly. There are a number of publicly shared DMPs available within the tool which can be reviewed, copied, and/or edited. Upon completion, DMPs can be exported for inclusion in a funding proposal.

For more information on the DMPTool, see the promotional video, The DMPTool: A Brief Overview, or contact a member of the HSLS Data Management Group.

~Melissa Ratajeski

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Walk a Mile in My Shoes

Strolling on the Pitt campus, have you ever encountered a blindfolded student using a white cane (and a helper), who is trying to “walk a mile in the shoes” of a person with vision impairment? This exercise, used by the School of Education Vision Studies program, is an example of experiential learning, which allows students to simulate a patient’s medical condition. Why? To heighten empathy and boost sensitivity about patient experiences.

While HSLS resources provide a solid knowledge-base for health sciences students, it is the experiential learning component which can readily facilitate the connection between book content and what patients actually confront.

Wearable technology is one method to help students “live” in a patient’s condition. This technology differs from patient simulators in which students respond to the patient’s health condition. Instead, wearables provide a pseudo-experience of what patients must endure.

Students in any field of Pitt’s health sciences are likely to encounter both geriatric patients and those with chronic obstructive pulmonary disease (COPD). How can a fit, agile 20 year old possibly understand geriatric infirmities? Donning the Age Simulation Suit allows the wearer to feel age-related impairments such as joint stiffness, hearing loss, and reduced coordination. To experience shortness of breath, a hallmark of COPD, students can wear the Empathy Lungs COPD Simulator, with torso constriction and airway mask.

Other wearables use augmented reality to simulate symptoms of mental disorders. Labyrinth Psychotica replicates the disturbing auditory and visual hallucinations of a psychotic episode using a headset and goggles. A simple, less immersive method combines earbuds and YouTube audio to mimic “hearing voices.”

Technology also exists to imitate pregnancy and the sensations of labor. The wearable Empathy Belly Pregnancy Simulator weighs 30 pounds, and allows wearers to undergo 20 of the typical symptoms/effects of pregnancy. Labor pain simulation consists of low-voltage electrodes attached to the abdomen that deliver shocks which mimic classic labor contraction patterns.

The formula is straightforward: library resources plus experiential learning. When students can apply textbook knowledge while walking in a patient’s shoes, who knows where their journey will take them?

~Rebecca Abromitis

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Microsoft Office Apps for Mobile Devices

MSApp_Word — Type and edit in the Word app for iPad

Using Word, Excel, or PowerPoint from your desktop or laptop may be an everyday occurrence in your professional or scholarly work. Microsoft has now made it easier to integrate your mobile devices into your Office workflow by offering new capabilities through their mobile apps.

Office for Android and iOS are available for free download, and now allow editing access through a free Microsoft account. Your Microsoft account gives you access to OneDrive, a cloud document service which allows you to access, edit, and save documents. A valid e-mail address is required to sign up for a free Microsoft account. Subscribers to Office 365, which allows better access and features across all platforms, can use their account to access the Office apps as well.

Most mobile devices have a separate app per product:

Microsoft Word for the iPhone/iPad or Android tablets
Microsoft Excel for the iPhone/iPad or Android tablets
Microsoft PowerPoint for the iPhone/iPad or Android tablets

For Android smartphones, Microsoft Office Mobile includes all three products in one app.

The app interface looks very similar to the desktop versions, with modifications that are optimized for a smaller screen. A ribbon with tabs provides icons and menus for editing features. Some features that are available in the desktop version, such as SmartArt and references, are not available in the apps. Other features have limited options, such as font color, and others are available only to Office 365 subscribers, such as changing page orientation.

MSApp_Excel — Insert formulas in spreadsheets using the Excel app for iPad

Documents can be opened from a number of places on your devices: from your e-mail, on a Web page, and from other apps. When syncing a new or edited document, you can save to your OneDrive account or Dropbox. Office 365 subscribers can also sync to iCloud. Any document can be sent via e-mail.

For assistance with Microsoft Office apps for mobile devices, contact Technology Services Librarian Julia Dahm.

~Julia Dahm

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Where Did REPROTOX® Go in MICROMEDEX?

MICROMEDEX contains reproductive risk information in its Reproductive Effects Micromedex® Solutions modules that include:

REPROTEXT® Reproductive Hazard Reference: presents in-depth reviews on the full-range of health effects of industrial chemicals commonly encountered in the workplace.
REPROTOX® Reproductive Hazard Information: covers the impact of the physical and chemical environment on human reproduction and development.
Shepard’s Catalog of Teratogenic Agents: contains up-to-date information on teratogenic agents including chemicals, food additives, household products, environmental pollutants, pharmaceuticals, and viruses.
TERIS Teratogen Information System: provides current information on the teratogenic effects of drugs and environmental agents. Agent summaries derived from thorough literature reviews rate reproductive risk and explain data used to determine the rating. Retrieval of agent summaries can be done using domestic, international, generic, and proprietary names.

Reproductive Effects modules can be accessed from MICOMEDEX’s intermediate search results (Option 1) Continue reading →

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PubMed’s “Save Search” and “Related Citations” Links Renamed

In order to make the popular PubMed database more user friendly, several heavily used links have been renamed.

The “RSS” link used to create an RSS feed for a search is now “Create RSS.”

The former “Save search” link is now called “Create alert.” Once you click on this link, the options are still the same. You can either save your search strategy or set up an automatic e-mail update.

PubMed "Create RSS" and "Create alert" linnks — **PubMed “Create RSS” and “Create alert” links**

The “Related citations” link is now called “Similar articles.” You’ll find this link under each entry in the results list and also at the top of the Abstract display discovery tool. As the name implies, this helpful feature lists articles closely related to the original article.

**“Similar articles” link in the results list**

**“Similar articles” link in the Abstract display discovery tool**

~Jill Foust

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HSLS Reference Librarian Retires after 33 Years of Service

Reference Librarian Ester Saghafi retired at the end of June after 33 years of service. She began her career at Pitt in the library at Western Psychiatric Institute and Clinic (WPIC) as both a cataloger and reference librarian. After the WPIC library closed in 2008, she transferred to Falk Library of the Health Sciences where she was appointed reference librarian and psychiatry liaison. From 2009–2013, she served as program manager and instructor for the Certificate of Advanced Study in Health Sciences Librarianship (HealthCAS), a post-master’s degree program. During her career at Pitt, Saghafi worked under three library directors: Lucile Stark, Pat Mickelson, and Barbara Epstein. Continue reading →

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Local High School Students Visit Native Voices Exhibit

Falk Library hosted students from Propel Andrew Street High School in Munhall, PA, to visit the National Library of Medicine’s Native Voices: Native Peoples’ Concepts of Health and Illness exhibit, which closed on May 31, 2015. The visit to the exhibit capped off the students’ six week exploration of topics such as public health, health disparities, and social determinants of health. The program outline was created as a collaboration between Timothy McMurray, science teacher, Christopher Taylor, social studies teacher, and Kimberly Moses, technology teacher, at Propel Andrew Street, along with Lydia Collins, consumer health coordinator at the National Network of Libraries of Medicine, Middle Atlantic Region.

The students worked in small groups to complete two activities. In the scavenger hunt, students watched interviews on iPads to find clues that illustrated the exhibit’s five themes. The other activity followed one of the lesson plans featured on the exhibit’s Web site. This led to a discussion on the impact of western expansion on native people’s environment, culture, and health.

Upon completion of the visit, the students interviewed individuals in their communities on their thoughts about the health of individuals where they live. This gave the students the opportunity to apply what they learned through the Native Voices interviews and design their own interview questions for members of their own community.

~Julia Dahm