Wednesday, November 16, 1-4 p.m., online

Register for CITE-Seq and Spatial Transcriptomics Data Analysis with Partek Flow

In this workshop, we will cover multiomics data analysis –  CITE Seq and Spatial Transcriptomics

Participants will learn how to

  • import 10x Genomics CITE-Seq and Spatial Transcriptomics (Visium) data to PartekFlow
  • merge expression data with histological information
  • filter and normalize the data
  • generate PCA, t-SNE, and UMAP plots to visualize data
  • identify cell populations, biomarkers, and compute differential gene expressions between two cell population

Participants are encouraged to work on solving the exercise problems during the hands-on session of the workshop.