- WHAT: Analysis of Spatially Resolved -omics Data in Partek Flow Bioinformatics Software
- WHEN: June 17th, 2-3 pm
- WHERE: Online; instructions upon registration
- WHO: Partek Flow instructors
- HOW: Register Here
Spatially resolved transcriptomics is a family of techniques designed to allow transcriptomic profiling of cells within a tissue. It has gained a lot of attention over recent years, earning it the Nature Methods 2020 method of the year title. Spatially resolved transcriptomic methods provide unique biological insight by preserving tissue context, but data analysis remains challenging. This presentation will introduce the graphical bioinformatics software Partek Flow and demonstrate its ability to seamlessly analyze a spatially resolved transcriptomics experiment.
Topics include:
- Analysis of multiple samples per study
- Integration of expression data with tissue data
- Identification of cell types based on gene expression profiles
- Differential gene expression analysis
- Biological interpretation by pathway enrichment
(Photo by Robynne Hu on Unsplash)