Wednesday, September 10, 2025, 1-4 p.m., Online
Taught by Ansuman Chattopadhyay and Srilakshmi Chaparala
Register for Transcriptome Analysis – From GEO Data Mining to Submission

This workshop is designed to equip participants with essential skills in locating and analyzing gene expression studies using the Gene Expression Omnibus (GEO) repository.

Upon completing this class, you should be able to:

  • find studies relevant to your topic in the Gene Expression Omnibus (GEO) repository.
  • use tools such as GEO2R, Correlation Engine, and iDEP for retrieving and analyzing gene expression count data.
  • create and interpret plots like PCA (Principal Component Analysis), heatmaps, volcano plots, and Venn diagrams.
  • submit high-throughput gene expression data to the GEO repository.