Wednesday, October 26, 1-4 p.m., online
This workshop will focus on Gene Expression Omnibus (GEO) repository. We will learn how to find high throughput gene expression studies – bulk RNA-seq/ scRNA-seq /microarray from GEO, retrieve gene expression count data, and generate a list of differentially expressed genes (DEG) between two conditions (disease state vs.
Thursday, October 27, 3-4:30 p.m., online
Jupyter Notebooks interweave code, data, and text into an executable “notebook” that can be published or shared as a self-contained object.
November 1, 2022, 1-2 p.m. ET
The vast complexities of biology require approaches that build a complete picture from single cells to tissues and beyond. Single-cell analysis is a powerful technique to characterize complex tissue types, identify rare cell populations, uncover regulatory relationships between genes, and track cell trajectories.
Tuesday, October 11, 12-1 p.m., online
This class covers the creation of data visualizations using the ggplot2 package in R. This is a flipped class and the third part of a series: Introduction to R, Data Wrangling in R, and Data Visualization in R.
Wednesday, October 12, 1-4 p.m., online
This workshop uses two library-licensed software – Ingenuity Pathway Analysis (IPA) and Illumina’s Correlation Engine (CE) to teach biological pathway enrichment analysis.