{"id":5864,"date":"2026-06-11T12:24:32","date_gmt":"2026-06-11T17:24:32","guid":{"rendered":"https:\/\/info.hsls.pitt.edu\/molbio\/?p=5864"},"modified":"2026-06-23T12:08:25","modified_gmt":"2026-06-23T17:08:25","slug":"learn-hsls-advanced-scrnaseq-analysis-using-partek-flow-focusing-on-multiple-samples-june-24","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2026\/06\/11\/learn-hsls-advanced-scrnaseq-analysis-using-partek-flow-focusing-on-multiple-samples-june-24\/","title":{"rendered":"Learn @ HSLS: Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples, June 24"},"content":{"rendered":"<p>Wednesday, June 24, 2026, 1-3 p.m., Online<br \/>\nTaught by Srilakshmi Chaparala<br \/>\n<a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/molecular-biology\/advanced-scrnaseq-analysis-using-partek-flow-focusing-multiple\">Register for Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples<\/a><\/p>\n<div class=\"field field--name-body field--type-text-with-summary field--label-hidden field__item\">\n<p>This is the 3rd workshop of our four-part workshop series \u201c<strong>Mastering Single-Cell Analysis with Partek Flow<\/strong>\u201d\u202fthat will provide in-depth exploration of single cell technologies and their applications. Leveraging Partek Flow software, this series will cover the entire workflow, from data import, pre-processing\u202fto results interpretation and visualization.<\/p>\n<p><strong>Workshop 3:\u202f Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples\u00a0<\/strong>dive into an advanced ScRNASeq analysis techniques using Partek Flow, exploring multiple sample datasets. Enhance your skills in complex single cell rnaseq data analysis covering clustering options, batch effects correction methods, and visualization techniques.<\/p>\n<\/div>\n<p><!--more--><\/p>\n<div class=\"field field--name-field-learning-objective field--type-string field--label-above\">\n<div><strong>Target Audience:<\/strong> Experimental biologists seeking to analyze single cell data generated through experiments or retrieved from public databases. The software covered in the workshop operates through a user-friendly, point-and-click graphical user interface, so programming experience is not required.<\/div>\n<div><\/div>\n<div class=\"field__label\"><strong>Upon completing this class, you should be able to:<\/strong><\/div>\n<ul class=\"field field--name-field-learning-objective field--type-string field--label-above field__items\">\n<li class=\"field__item\">Import and preprocess single-cell count matrix data for multiple samples<\/li>\n<li class=\"field__item\">Perform quality control and filtering of cells and genes<\/li>\n<li class=\"field__item\">Identify and correct the batch effects using various methods (eg: Harmony)<\/li>\n<li class=\"field__item\">Perform advanced clustering and dimensionality reduction techniques<\/li>\n<li class=\"field__item\">Perform cell type annotations, differential expression between multiple samples and visualize<\/li>\n<\/ul>\n<\/div>\n<div class=\"field field--name-field-class-level field--type-list-string field--label-inline\">\n<div class=\"field__label\"><strong>Level:<\/strong> Novice<\/div>\n<\/div>\n<div><\/div>\n<div>\n<div class=\"field field--name-field-class-prerequisites field--type-text-long field--label-inline\">\n<div class=\"field__label\"><strong>Prerequisites:<\/strong> Optional but recommended: Watch the previous workshop recordings (available on our Class Materials page)<\/div>\n<div><\/div>\n<\/div>\n<div class=\"field field--name-field-pre-work-description field--type-text-long field--label-inline\">\n<div class=\"field__label\"><strong>Recording status:<\/strong> This class will be recorded and shared with attendees.<\/div>\n<\/div>\n<\/div>\n<div class=\"field field--name-field-class-materials field--type-list-string field--label-inline\">\n<div><\/div>\n<div class=\"field__label\"><strong>Class Materials:<\/strong> Class materials will be shared with attendees.<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>Wednesday, June 24, 2026, 1-3 p.m., Online<br \/>\nTaught by Srilakshmi Chaparala<br \/>\n<a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/molecular-biology\/advanced-scrnaseq-analysis-using-partek-flow-focusing-multiple\">Register for Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples<\/a><\/p>\n<p>This is the 3rd workshop of our four-part workshop series \u201c<strong>Mastering Single-Cell Analysis with Partek Flow<\/strong>\u201d\u202fthat will provide in-depth exploration of single cell technologies and their applications.<\/p>\n<p><a class=\"read-more\" alt= \"Learn @ HSLS: Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples, June 24\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2026\/06\/11\/learn-hsls-advanced-scrnaseq-analysis-using-partek-flow-focusing-on-multiple-samples-june-24\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":46,"featured_media":5342,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[68],"tags":[],"class_list":["post-5864","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-june-2026"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5864","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/46"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=5864"}],"version-history":[{"count":1,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5864\/revisions"}],"predecessor-version":[{"id":5865,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5864\/revisions\/5865"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media\/5342"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=5864"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=5864"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=5864"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}