{"id":5492,"date":"2025-01-06T16:17:44","date_gmt":"2025-01-06T21:17:44","guid":{"rendered":"https:\/\/info.hsls.pitt.edu\/molbio\/?p=5492"},"modified":"2025-04-16T14:01:49","modified_gmt":"2025-04-16T19:01:49","slug":"spring-mbis-class-schedule-2","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2025\/01\/06\/spring-mbis-class-schedule-2\/","title":{"rendered":"Spring MBIS Class Schedule"},"content":{"rendered":"

This season’s lineup offers a diverse range of contemporary bioinformatics topics, such as new expanded offerings on using Partek Flow and our regular introduction to the All of Us<\/em> Research Workbench. This semester also sees the return of our popular R and Python bootcamps. When you register, you will receive links to workshop materials.<\/p>\n

<\/p>\n

\n
Bulk RNA-seq data analysis using CLC Genomics Workbench<\/a><\/div>\n<\/div>\n
\n
Wed 1\/15\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a04:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
R Bootcamp Week 1: Introduction to R, RStudio, and Quarto Markdown<\/a><\/div>\n<\/div>\n
\n
Thu 1\/23\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Transcriptome Analysis – From GEO Data Mining to Submission<\/a><\/div>\n<\/div>\n
\n
Wed 1\/29\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a04:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
R Bootcamp Week 2: Data Centric R with tidy verse<\/a><\/div>\n<\/div>\n
\n
Thu 1\/30\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Introduction to Single Cell Technologies and Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 2\/5\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
R Bootcamp Week3: Data Exploration in R with tidyverse<\/a><\/div>\n<\/div>\n
\n
Thu 2\/6\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Basic ScRNA-Seq Analysis using Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 2\/12\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
R Bootcamp Week4: Data Wrangling in R with tidyverse<\/a><\/div>\n<\/div>\n
\n
Thu 2\/13\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Advanced ScRNASeq Analysis Using Partek Flow focusing on Multiple samples<\/a><\/div>\n<\/div>\n
\n
Wed 2\/19\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Single Cell Multiomics Analysis Using Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 2\/26\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Introduction to All of Us Researcher Workbench<\/a><\/div>\n<\/div>\n
\n
Thu 2\/27\/2025<\/div>\n
12:00pm\u00a0<\/span><\/span>to\u00a01:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Python Bootcamp Week 1: Introduction to Python, JupyterLab, and Jupyter Notebook<\/a><\/div>\n<\/div>\n
\n
Tue 3\/11\/2025<\/div>\n
12:00pm\u00a0<\/span><\/span>to\u00a01:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
IPA and Correlation Engine – A Comprehensive Approach to Pathway Enrichment Analysis<\/a><\/div>\n<\/div>\n
\n
Wed 3\/12\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a04:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Python Bootcamp Week 2: Data Centric Python with pandas<\/a><\/div>\n<\/div>\n
\n
Tue 3\/18\/2025<\/div>\n
12:00pm\u00a0<\/span><\/span>to\u00a01:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Python Bootcamp Week 3: Data Exploration with pandas and seaborn<\/a><\/div>\n<\/div>\n
\n
Tue 3\/25\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Gene Regulation<\/a><\/div>\n<\/div>\n
\n
Wed 3\/26\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a04:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Learning Python with AI<\/a><\/div>\n<\/div>\n
\n
Tue 4\/1\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a02:30pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
Introduction to Spatial Transcriptomics technologies and Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 4\/9\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
\u202fBasic Spatial Transcriptomic Analysis using Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 4\/16\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n
\n
<\/div>\n
\u202fAdvanced Spatial Transcriptomic Analysis using Partek Flow<\/a><\/div>\n<\/div>\n
\n
Wed 4\/23\/2025<\/div>\n
1:00pm\u00a0<\/span><\/span>to\u00a03:00pm<\/span><\/span><\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

This season’s lineup offers a diverse range of contemporary bioinformatics topics, such as new expanded offerings on using Partek Flow and our regular introduction to the All of Us<\/em> Research Workbench. This semester also sees the return of our popular R and Python bootcamps.<\/p>\n

Read more…<\/a><\/p>\n","protected":false},"author":46,"featured_media":5348,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[14,52],"tags":[],"class_list":["post-5492","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-interesting","category-january-2025"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5492","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/46"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=5492"}],"version-history":[{"count":3,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5492\/revisions"}],"predecessor-version":[{"id":5501,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5492\/revisions\/5501"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media\/5348"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=5492"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=5492"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=5492"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}