{"id":5280,"date":"2024-02-29T10:42:52","date_gmt":"2024-02-29T15:42:52","guid":{"rendered":"https:\/\/info.hsls.pitt.edu\/molbio\/?p=5280"},"modified":"2024-03-13T13:31:07","modified_gmt":"2024-03-13T18:31:07","slug":"march-6-ipa-and-correlation-engine-a-comprehensive-approach-to-pathway-enrichment-analysis","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2024\/02\/29\/march-6-ipa-and-correlation-engine-a-comprehensive-approach-to-pathway-enrichment-analysis\/","title":{"rendered":"March 6: IPA and Correlation Engine &#8211; A Comprehensive Approach to Pathway Enrichment Analysis"},"content":{"rendered":"<p>Wednesday, March 6, 2024, 1-4 p.m.<br \/>\nHybrid session: Attend online or in person in the Falk Library Classroom<br \/>\n<a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/ipa-and-correlation-engine-comprehensive-approach-pathway-enrichment-analysis\/6513\">Register for IPA and Correlation Engine &#8211; A Comprehensive Approach to Pathway Enrichment Analysis<\/a><\/p>\n<div class=\"field field--name-body field--type-text-with-summary field--label-hidden field__item\">\n<p>In this engaging workshop, you will learn how to analyze differentially expressed genes (DEG) associated with genome-scale experiments, such as RNA-Seq gene expression studies, and gain mechanistic insights using Ingenuity Pathway Analysis and Correlation Engine software.<\/p>\n<\/div>\n<p><!--more--><\/p>\n<div class=\"field field--name-field-learning-objective field--type-string field--label-above\">\n<div class=\"field__label\">Upon completing this class, you should be able to:<\/div>\n<ul class=\"field field--name-field-learning-objective field--type-string field--label-above field__items\">\n<li class=\"field__item\">Retrieve a list of DEGs associated with genome-scale experiments (e.g., &#8220;treatment vs. control,&#8221; &#8220;tumor vs. normal,&#8221; or &#8220;infected vs. mock&#8221;) by searching gene expression data repositories (NCBI GEO)<\/li>\n<li class=\"field__item\">Gain mechanistic insights by identifying statistically overrepresented terms (biological functions, molecular processes, diseases, etc.) and pathways present in the DEG list<\/li>\n<li class=\"field__item\">Predict upstream causal regulators (transcription factors, miRNA, etc.)<\/li>\n<li class=\"field__item\">Retrieve datasets from GEO that exhibit similar or opposite gene expression profiles<\/li>\n<\/ul>\n<\/div>\n<p><strong>See more learning options on this topic:\u00a0<a href=\"https:\/\/www.hsls.pitt.edu\/taxonomy\/term\/1353\">Pathway Enrichment Analysis<\/a><\/strong><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Wednesday, March 6, 2024, 1-4 p.m.<br \/>\nHybrid session: Attend online or in person in the Falk Library Classroom<br \/>\n<a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/ipa-and-correlation-engine-comprehensive-approach-pathway-enrichment-analysis\/6513\">Register for IPA and Correlation Engine &#8211; A Comprehensive Approach to Pathway Enrichment Analysis<\/a><\/p>\n<p>In this engaging workshop, you will learn how to analyze differentially expressed genes (DEG) associated with genome-scale experiments, such as RNA-Seq gene expression studies, and gain mechanistic insights using Ingenuity Pathway Analysis and Correlation Engine software.<\/p>\n<p><a class=\"read-more\" alt= \"March 6: IPA and Correlation Engine &#8211; A Comprehensive Approach to Pathway Enrichment Analysis\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2024\/02\/29\/march-6-ipa-and-correlation-engine-a-comprehensive-approach-to-pathway-enrichment-analysis\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":46,"featured_media":4900,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[41],"tags":[],"class_list":["post-5280","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-march-2024"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5280","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/46"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=5280"}],"version-history":[{"count":4,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5280\/revisions"}],"predecessor-version":[{"id":5287,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5280\/revisions\/5287"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media\/4900"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=5280"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=5280"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=5280"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}