{"id":5055,"date":"2023-04-11T10:00:32","date_gmt":"2023-04-11T15:00:32","guid":{"rendered":"https:\/\/info.hsls.pitt.edu\/molbio\/?p=5055"},"modified":"2023-04-25T15:22:12","modified_gmt":"2023-04-25T20:22:12","slug":"april-19-command-line-for-biologists","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2023\/04\/11\/april-19-command-line-for-biologists\/","title":{"rendered":"April 19: Command Line for Biologists"},"content":{"rendered":"<p>Wednesday, April 19, 1-3 p.m., online<\/p>\n<p><a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/command-line-biologists\/4107\"><strong>Register for Command Line for Biologists<\/strong><\/a><\/p>\n<p>This workshop is based on the\u00a0<a href=\"http:\/\/swcarpentry.github.io\/shell-novice\/\">Software Carpentry Lesson on the Unix Shell<\/a>. The Unix shell is a powerful tool that allows users to perform simple tasks, including managing data. In recent years, basic programming skills such as Unix shell have become vital for biomedical research.<!--more--><\/p>\n<p>In this workshop, you will learn how to:<\/p>\n<ul>\n<li>Access a remote Unix machine through the Center for Research Computing \u2013 HTC Cluster<\/li>\n<li>Use basic Unix commands for navigating and working with files and directories<\/li>\n<li>Generate MD5SUMs for data upload to NCBI GEO<\/li>\n<li>Transfer files using FTP client software<\/li>\n<li>Access HTC Cluster-installed open-source bioinformatics software packages<\/li>\n<\/ul>\n<p>You must sign up for a Center for Research Computing\u00a0<a href=\"https:\/\/crc.pitt.edu\/apply\/\">HPC allocation<\/a> prior to attending this workshop.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Wednesday, April 19, 1-3 p.m., online<\/p>\n<p><a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/command-line-biologists\/4107\"><strong>Register for Command Line for Biologists<\/strong><\/a><\/p>\n<p>This workshop is based on the\u00a0<a href=\"http:\/\/swcarpentry.github.io\/shell-novice\/\">Software Carpentry Lesson on the Unix Shell<\/a>. The Unix shell is a powerful tool that allows users to perform simple tasks, including managing data.<\/p>\n<p><a class=\"read-more\" alt= \"April 19: Command Line for Biologists\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2023\/04\/11\/april-19-command-line-for-biologists\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":4,"featured_media":5056,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[27],"tags":[],"class_list":["post-5055","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-april-2023"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5055","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=5055"}],"version-history":[{"count":2,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5055\/revisions"}],"predecessor-version":[{"id":5058,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/5055\/revisions\/5058"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media\/5056"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=5055"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=5055"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=5055"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}