This information is over 2 years old. Information was current at time of publication.{"id":4203,"date":"2021-06-12T10:02:29","date_gmt":"2021-06-12T15:02:29","guid":{"rendered":"https:\/\/info.hsls.pitt.edu\/molbio\/?p=4203"},"modified":"2021-06-21T15:05:40","modified_gmt":"2021-06-21T20:05:40","slug":"6-17-webinar-spatially-resolved-transcriptomics","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2021\/06\/12\/6-17-webinar-spatially-resolved-transcriptomics\/","title":{"rendered":"6\/17 webinar: Spatially Resolved Transcriptomics"},"content":{"rendered":"<ul>\n<li><strong><span style=\"color: #255278\">WHAT:<\/span> <\/strong>Analysis of Spatially Resolved -omics Data in Partek Flow Bioinformatics Software<\/li>\n<li><strong><span style=\"color: #255278\">WHEN:<\/span> <\/strong>June 17th, 2-3 pm<\/li>\n<li><strong><span style=\"color: #255278\">WHERE:<\/span> <\/strong>Online; instructions upon registration<\/li>\n<li><strong><span style=\"color: #255278\">WHO:<\/span> <\/strong>Partek Flow instructors<\/li>\n<li><strong><span style=\"color: #255278\">HOW:<\/span> <\/strong><a href=\"https:\/\/www.partek.com\/webinar\/analysis-of-spatially-resolved-omics-data-in-partek-flow-bioinformatics-software\/\">Register Here<\/a><\/li>\n<\/ul>\n<p><!--more-->Spatially resolved transcriptomics is a family of techniques designed to allow transcriptomic profiling of cells within a tissue. It has gained a lot of attention over recent years, earning it the <a href=\"https:\/\/www.nature.com\/articles\/s41592-020-01042-x\"><i>Nature Methods<\/i> 2020 method of the year<\/a> title. Spatially resolved transcriptomic methods provide unique biological insight by preserving tissue context, but data analysis remains challenging. This presentation will introduce the graphical bioinformatics software Partek Flow and demonstrate its ability to seamlessly analyze a spatially resolved transcriptomics experiment.<\/p>\n<p><strong><span style=\"color: #255278\">Topics include:<\/span><\/strong><\/p>\n<ul>\n<li>Analysis of multiple samples per study<\/li>\n<li>Integration of expression data with tissue data<\/li>\n<li>Identification of cell types based on gene expression profiles<\/li>\n<li>Differential gene expression analysis<\/li>\n<li>Biological interpretation by pathway enrichment<\/li>\n<\/ul>\n<p>(Photo by <a href=\"https:\/\/unsplash.com\/@robynnexy?utm_source=unsplash&amp;utm_medium=referral&amp;utm_content=creditCopyText\">Robynne Hu<\/a> on <a href=\"https:\/\/unsplash.com\/s\/photos\/space?utm_source=unsplash&amp;utm_medium=referral&amp;utm_content=creditCopyText\">Unsplash<\/a>)<\/p>\n","protected":false},"excerpt":{"rendered":"<ul>\n<li><strong><span style=\"color: #255278\">WHAT:<\/span> <\/strong>Analysis of Spatially Resolved -omics Data in Partek Flow Bioinformatics Software<\/li>\n<li><strong><span style=\"color: #255278\">WHEN:<\/span> <\/strong>June 17th, 2-3 pm<\/li>\n<li><strong><span style=\"color: #255278\">WHERE:<\/span> <\/strong>Online; instructions upon registration<\/li>\n<li><strong><span style=\"color: #255278\">WHO:<\/span> <\/strong>Partek Flow instructors<\/li>\n<li><strong><span style=\"color: #255278\">HOW:<\/span> <\/strong><a href=\"https:\/\/www.partek.com\/webinar\/analysis-of-spatially-resolved-omics-data-in-partek-flow-bioinformatics-software\/\">Register Here<\/a><\/li>\n<\/ul>\n<p><a class=\"read-more\" alt= \"6\/17 webinar: Spatially Resolved Transcriptomics\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2021\/06\/12\/6-17-webinar-spatially-resolved-transcriptomics\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":31,"featured_media":4204,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[1],"tags":[],"class_list":["post-4203","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/4203","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/31"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=4203"}],"version-history":[{"count":4,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/4203\/revisions"}],"predecessor-version":[{"id":4208,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/4203\/revisions\/4208"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media\/4204"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=4203"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=4203"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=4203"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}