This information is over 2 years old. Information was current at time of publication.{"id":3090,"date":"2019-02-15T12:44:09","date_gmt":"2019-02-15T17:44:09","guid":{"rendered":"http:\/\/info.hsls.pitt.edu\/molbio\/?p=3090"},"modified":"2019-02-22T13:41:34","modified_gmt":"2019-02-22T18:41:34","slug":"220-wksp-pathway-analysis","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2019\/02\/15\/220-wksp-pathway-analysis\/","title":{"rendered":"2\/20 wksp: Pathway Analysis"},"content":{"rendered":"<ul>\n<li><strong><span style=\"color: #cc0052\">WHAT:<\/span> <\/strong>RNA-Seq &amp; CLC Genomics<\/li>\n<li><strong><span style=\"color: #cc0052\">WHEN:<\/span> <\/strong>February 20th, 1-4 pm<\/li>\n<li><strong><span style=\"color: #cc0052\">WHERE:<\/span> <\/strong>Scaife Hall, Falk Library, Classroom 2<\/li>\n<li><strong><span style=\"color: #cc0052\">WHO:<\/span> <\/strong>Ansuman Chattopadhyay, PhD<\/li>\n<li><strong><span style=\"color: #cc0052\">HOW:<\/span> <\/strong>Register <a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/pathway-analysis\/668\">here<\/a><\/li>\n<\/ul>\n<p><!--more-->Workshop Guide: <a href=\"https:\/\/hsls.libguides.com\/MolBioWorkshops\/PathAnaly\">https:\/\/hsls.libguides.com\/MolBioWorkshops\/PathAnaly<\/a><\/p>\n<p>Please register for <a href=\"http:\/\/hsls.libguides.com\/molbio\/bscoreng\">Correlation Engine<\/a> and <a href=\"http:\/\/hsls.libguides.com\/molbio\/ipa\">Ingenuity Pathway Analysis<\/a>.<\/p>\n<p>This hands-on workshop introduces open access and commercial biological pathway informatics tools. Learn how to mine a list of differentially-expressed genes associated with a disease of interest by searching the NCBI Gene Expression Omnibus (GEO) using the library-licensed tool Correlation Engine.  Then uncover the biology hidden behind the extracted gene list by searching protein-protein interactions and literature-curated gene\/protein knowledgebases using pathway informatics software, including Ingenuity Pathway Analysis (IPA), NIH DAVID, Enrichr, and MetaCore.<\/p>\n<p>Please <a href=\"https:\/\/www.hsls.pitt.edu\/ask-a-molbio-specialist\">contact<\/a> the <a href=\"http:\/\/www.hsls.pitt.edu\/molbio\">HSLS Molecular Biology Information Service<\/a> with any questions.<\/p>\n","protected":false},"excerpt":{"rendered":"<ul>\n<li><strong><span style=\"color: #cc0052\">WHAT:<\/span> <\/strong>RNA-Seq &amp; CLC Genomics<\/li>\n<li><strong><span style=\"color: #cc0052\">WHEN:<\/span> <\/strong>February 20th, 1-4 pm<\/li>\n<li><strong><span style=\"color: #cc0052\">WHERE:<\/span> <\/strong>Scaife Hall, Falk Library, Classroom 2<\/li>\n<li><strong><span style=\"color: #cc0052\">WHO:<\/span> <\/strong>Ansuman Chattopadhyay, PhD<\/li>\n<li><strong><span style=\"color: #cc0052\">HOW:<\/span> <\/strong>Register <a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/pathway-analysis\/668\">here<\/a><\/li>\n<\/ul>\n<p><a class=\"read-more\" alt= \"2\/20 wksp: Pathway Analysis\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2019\/02\/15\/220-wksp-pathway-analysis\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":31,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[1],"tags":[],"class_list":["post-3090","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/3090","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/31"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=3090"}],"version-history":[{"count":6,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/3090\/revisions"}],"predecessor-version":[{"id":3099,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/3090\/revisions\/3099"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=3090"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=3090"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=3090"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}