This information is over 2 years old. Information was current at time of publication.{"id":2555,"date":"2018-02-16T15:03:34","date_gmt":"2018-02-16T20:03:34","guid":{"rendered":"http:\/\/info.hsls.pitt.edu\/molbio\/?p=2555"},"modified":"2018-02-16T15:03:34","modified_gmt":"2018-02-16T20:03:34","slug":"228-wksp-path-analysis","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2018\/02\/16\/228-wksp-path-analysis\/","title":{"rendered":"2\/28 wksp: Path Analysis"},"content":{"rendered":"<p><strong><span style=\"color: purple;font-size: medium\">Pathway Analysis<\/span><\/strong><br \/>\n<strong><span style=\"font-size: 5\">by Ansuman Chattopadhyay, PhD<br \/>\n<\/span><\/strong><br \/>\n<strong><span style=\"color: plum\">Wednesday, 28th February 2018<br \/>\n1-4 pm<br \/>\nFalk Library Classroom 2 (upstairs)<\/span><\/strong><\/p>\n<p>Register <a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/molbio\/pathway-analysis\/668\">here<\/a>.<\/p>\n<p>Also <a href=\"http:\/\/www.hsls.pitt.edu\/molbio\/software_registration\">register<\/a> for the following tools: IPA, Correlation Engine, MetaCore, &amp; KPA.<\/p>\n<p>This hands-on workshop introduces open access and commercial biological pathway informatics tools. First we will learn how to mine a list of differentially expressed genes associated with a disease of interest by searching the NCBI Gene Expression Omnibus (GEO) using the library-licensed tool Correlation Engine. Then we will focus on uncovering the biology hidden behind the extracted gene list by searching protein-protein interactions and literature-curated gene\/protein knowledgebases using pathway informatics software, including Ingenuity Pathway Analysis (IPA), NIH DAVID, Enrichr, MetaCore, and Key Pathway Advisor (KPA).<\/p>\n<p>Workshop Guide: <a href=\"http:\/\/hsls.libguides.com\/pathwayinformatics\">http:\/\/hsls.libguides.com\/pathwayinformatics<\/a><\/p>\n<p>This class is approved for AMA Category 2 CME credit.<\/p>\n<p><a href=\"http:\/\/files.hsls.pitt.edu\/files\/molbio\/MolbioWorkshops.pdf\">HSLS Winter\/Spring 2018 MolBio Info Service Training Workshops schedule<\/a><\/p>\n<p>Questions? <a href=\"https:\/\/www.hsls.pitt.edu\/ask-a-molbio-specialist\">Contact<\/a> the <a href=\"http:\/\/www.hsls.pitt.edu\/molbio\">HSLS Molecular Biology Information Service<\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p><strong><span style=\"color: purple;font-size: medium\">Pathway Analysis<\/span><\/strong><br \/>\n<strong><span style=\"font-size: 5\">by Ansuman Chattopadhyay, PhD<br \/>\n<\/span><\/strong><br \/>\n<strong><span style=\"color: plum\">Wednesday, 28th February 2018<br \/>\n1-4 pm<br \/>\nFalk Library Classroom 2 (upstairs)<\/span><\/strong><\/p>\n<p>Register <a href=\"https:\/\/www.hsls.pitt.edu\/instruction\/molbio\/pathway-analysis\/668\">here<\/a>.<\/p>\n<p><a class=\"read-more\" alt= \"2\/28 wksp: Path Analysis\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2018\/02\/16\/228-wksp-path-analysis\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":31,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[14],"tags":[],"class_list":["post-2555","post","type-post","status-publish","format-standard","hentry","category-interesting"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/2555","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/31"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=2555"}],"version-history":[{"count":2,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/2555\/revisions"}],"predecessor-version":[{"id":2557,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/2555\/revisions\/2557"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=2555"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=2555"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=2555"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}