This information is over 2 years old. Information was current at time of publication.{"id":1713,"date":"2015-10-12T12:52:02","date_gmt":"2015-10-12T17:52:02","guid":{"rendered":"http:\/\/info.hsls.pitt.edu\/molbio\/?p=1713"},"modified":"2015-10-12T12:52:02","modified_gmt":"2015-10-12T17:52:02","slug":"wksp-pathway-analysis-3","status":"publish","type":"post","link":"https:\/\/info.hsls.pitt.edu\/molbio\/2015\/10\/12\/wksp-pathway-analysis-3\/","title":{"rendered":"WKSP: Pathway Analysis"},"content":{"rendered":"<p><strong><span style=\"color: red;font-size: medium\"><big>Pathway Analysis: NIH DAVID &amp; IPA<\/big><\/span><\/strong><br \/>\n<strong><span style=\"font-size: medium\">by Ansuman Chattopadhyay, PhD<br \/>\n<\/span><\/strong><br \/>\n<strong><span style=\"color: #33cc00;font-size: medium\">Wednesday, 21st October 2015<br \/>\n1-3 pm<br \/>\nFalk Library Classroom 2 (upstairs)<\/span><\/strong><\/p>\n<p>Registration is NOT required.<\/p>\n<p>This hands-on workshop introduces open access and commercial biological pathway informatics tools. First we will learn how to mine a list of differentially expressed genes associated with a disease of interest by searching the NCBI Gene Expression Omnibus (GEO) using the library-licensed tool NextBio. Then we will focus on uncovering the biology hidden behind the extracted gene list by searching protein-protein interactions and literature-curated gene\/protein knowledgebases using pathway informatics software, including Ingenuity Pathway Analysis (IPA) and NIH DAVID.<\/p>\n<p>This class is approved for AMA Category 2 CME credit.<\/p>\n<p><a href=\"http:\/\/files.hsls.pitt.edu\/files\/molbio\/MolbioWorkshops.pdf\">HSLS Fall 2015 Bioinformatics Training Workshops schedule<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p><strong><span style=\"color: red;font-size: medium\">Pathway Analysis: NIH DAVID &amp; IPA<\/span><\/strong><br \/>\n<strong><span style=\"font-size: medium\">by Ansuman Chattopadhyay, PhD<br \/>\n<\/span><\/strong><br \/>\n<strong><span style=\"color: #33cc00;font-size: medium\">Wednesday, 21st October 2015<br \/>\n1-3 pm<br \/>\nFalk Library Classroom 2 (upstairs)<\/span><\/strong><\/p>\n<p>Registration is NOT required.<\/p>\n<p><a class=\"read-more\" alt= \"WKSP: Pathway Analysis\" href=\"https:\/\/info.hsls.pitt.edu\/molbio\/2015\/10\/12\/wksp-pathway-analysis-3\/\">Read more&hellip;<\/a><\/p>\n","protected":false},"author":31,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[13],"tags":[],"class_list":["post-1713","post","type-post","status-publish","format-standard","hentry","category-workshops"],"_links":{"self":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/1713","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/users\/31"}],"replies":[{"embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/comments?post=1713"}],"version-history":[{"count":1,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/1713\/revisions"}],"predecessor-version":[{"id":1714,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/posts\/1713\/revisions\/1714"}],"wp:attachment":[{"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/media?parent=1713"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/categories?post=1713"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/info.hsls.pitt.edu\/molbio\/wp-json\/wp\/v2\/tags?post=1713"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}