What's New @ HSLS MolBio

October 26 – Gene Expression Data Mining and Analysis

Wednesday, October 26, 1-4 p.m., online

Register for Gene Expression Data Mining and Analysis

This workshop will focus on Gene Expression Omnibus (GEO) repository. We will learn how to find high throughput gene expression studies – bulk RNA-seq/ scRNA-seq /microarray from GEO, retrieve gene expression count data, and generate a list of differentially expressed genes (DEG) between two conditions (disease state vs.

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October 27 – Using Jupyter Notebooks in Data Science Research and Education

Thursday, October 27, 3-4:30 p.m., online

Register for Using Jupyter Notebooks in Data Science Research and Education

Jupyter Notebooks interweave code, data, and text into an executable “notebook” that can be published or shared as a self-contained object.

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November 1 – 10x Genomics™ and Partek® Single Cell Data Analysis Solutions Webinar

November 1, 2022, 1-2 p.m. ET

Join via Zoom

The vast complexities of biology require approaches that build a complete picture from single cells to tissues and beyond. Single-cell analysis is a powerful technique to characterize complex tissue types, identify rare cell populations, uncover regulatory relationships between genes, and track cell trajectories.

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October 11 – Data Visualization in R using ggplot2

Tuesday, October 11, 12-1 p.m., online

Register for Data Visualization in R using ggplot2

This class covers the creation of data visualizations using the ggplot2 package in R. This is a flipped class and the third part of a series: Introduction to R, Data Wrangling in R, and Data Visualization in R.

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October 12 – Pathway Enrichment Analysis using IPA and CE

Wednesday, October 12, 1-4 p.m., online

Register for Pathway Enrichment Analysis using IPA and CE

This workshop uses two library-licensed software – Ingenuity Pathway Analysis (IPA) and Illumina’s Correlation Engine (CE)  to teach biological pathway enrichment analysis.

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RCE@Pitt Data Basics Workshop Series

Sign up for Data Basics Fall 2022 Workshop Series

The Research Computing Education initiative (RCE@Pitt) is hosting the Data Basics workshop series again this Spring. We will be running Data Basics on Tuesday evenings from 5-8 PM starting on November 1st and running until December 13th.

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