What's New @ HSLS MolBio | 2025

Learn @ HSLS: IPA and Correlation Engine – A Comprehensive Approach to Pathway Enrichment Analysis, June 18

Wednesday, June 18, 2025, 1-4 p.m., Online
Taught by Ansuman Chattopadhyay and Srilakshmi Chaparala
Register for IPA and Correlation Engine – A Comprehensive Approach to Pathway Enrichment Analysis

In this engaging workshop, you will learn how to analyze differentially expressed genes (DEG) associated with genome-scale experiments, such as RNA-Seq gene expression studies, and gain mechanistic insights using Ingenuity Pathway Analysis and Correlation Engine software.

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Learn @ HSLS: Introduction to All of Us Researcher Workbench, June 26

Thursday, June 26, 2025, noon-1:30 p.m., Online
Taught by Alexis Cenname and Ansuman Chattopadhyay
Register for Introduction to All of Us Researcher Workbench

Join us for a class on the All of Us Researchers Workbench – a cloud-based platform that provides researchers with access to data generated by the All of Us Research Program (AoURP).

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Learn @ HSLS: Gene Expression Visualization using PartekFlow and Cytoscape, July 2

Wednesday, July 2, 2025, 1-3 p.m., Online
Taught by Srilakshmi Chaparala
Register for Gene Expression Visualization using PartekFlow and Cytoscape

This workshop is on the visualization of gene expression data using HSLS-licensed Partek Flow software as well as open-access Cytoscape software.

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Apply for PSC/CMU/Pitt Open Hackathon by June 25

The word “Hackathon” brings up images of teenagers gathered over laptops surrounded by pizza boxes, but the September Open Hackathon hosted by the Pittsburgh Supercomputing Center, Pitt and CMU promises to be something very different:

PIs with active projects will be paired in peer-to-peer engagement with domain experts that meet their specific research needs, as well as representatives from NVIDIA and OpenACC.

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Qiagen Webinars in June

Qiagen is offering a series of bioinformatics webinars this month. See below for a schedule of sessions and to register.

De novo assembly, BLAST and genome finishing using CLC Genomics Workbench
Wednesday, June 18, 2025
Register for June 18

ChIP-seq, Histone-seq and Methyl-seq analysis using CLC Genomics Workbench
Tuesday, June 24, 2025
Register for June 24

From variants to vision: Driving oncology breakthroughs in translational research
Wednesday, June 25, 2025
Register for June 25

Multi-omics (metabolomics, proteomics, transcriptomics) analysis using QIAGEN Ingenuity Pathway Analysis
Thursday, June 26, 2025
Register for June 26

Past recorded webinars are also available to watch on Qiagen’s website.

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Learn @ HSLS: Bulk RNA-seq data analysis using CLC Genomics Workbench, May 28

Wednesday,  May 28, 2025, 1-4pm, Online
Taught by Ansuman Chattopadhyay and Srilakshmi Chaparala
Register for Bulk RNA-seq data analysis using CLC Genomics Workbench

This workshop teaches bulk RNA-Seq data analysis using CLC Genomics Workbench software. 

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