Pathway Analysis
by Ansuman Chattopadhyay, PhD
Wednesday, 28th February 2018
1-4 pm
Falk Library Classroom 2 (upstairs)
Register here.
Also register for the following tools: IPA, Correlation Engine, MetaCore, & KPA.
This hands-on workshop introduces open access and commercial biological pathway informatics tools. First we will learn how to mine a list of differentially expressed genes associated with a disease of interest by searching the NCBI Gene Expression Omnibus (GEO) using the library-licensed tool Correlation Engine. Then we will focus on uncovering the biology hidden behind the extracted gene list by searching protein-protein interactions and literature-curated gene/protein knowledgebases using pathway informatics software, including Ingenuity Pathway Analysis (IPA), NIH DAVID, Enrichr, MetaCore, and Key Pathway Advisor (KPA).
Workshop Guide: http://hsls.libguides.com/pathwayinformatics
This class is approved for AMA Category 2 CME credit.
HSLS Winter/Spring 2018 MolBio Info Service Training Workshops schedule
Questions? Contact the HSLS Molecular Biology Information Service.